WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcription Target       Name:hsa_AACTTT_UNKNOWN       ID:DB_ID:1851
C=1859; O=11; E=1.34; R=8.23; rawP=3.53e-08; adjP=3.39e-06
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000165061 NA ZMAT4 zinc finger, matrin-type 4 79698 ENSG00000165061
2  ENSG00000106069 NA CHN2 chimerin (chimaerin) 2 1124 ENSG00000106069
3  ENSG00000107295 NA SH3GL2 SH3-domain GRB2-like 2 6456 ENSG00000107295
4  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
5  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833
6  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
7  ENSG00000169760 NA NLGN1 neuroligin 1 22871 ENSG00000169760
8  ENSG00000049192 NA ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 11174 ENSG00000049192
9  ENSG00000112280 NA COL9A1 collagen, type IX, alpha 1 1297 ENSG00000112280
10  ENSG00000086475 NA SEPHS1 selenophosphate synthetase 1 22929 ENSG00000086475
11  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_CTTTAAR_UNKNOWN       ID:DB_ID:2170
C=960; O=8; E=0.69; R=11.59; rawP=2.93e-07; adjP=1.41e-05
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
2  ENSG00000104332 NA SFRP1 secreted frizzled-related protein 1 6422 ENSG00000104332
3  ENSG00000049192 NA ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 11174 ENSG00000049192
4  ENSG00000112280 NA COL9A1 collagen, type IX, alpha 1 1297 ENSG00000112280
5  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
6  ENSG00000172954 NA LCLAT1 lysocardiolipin acyltransferase 1 253558 ENSG00000172954
7  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833
8  ENSG00000086475 NA SEPHS1 selenophosphate synthetase 1 22929 ENSG00000086475


Database:Transcription Target       Name:hsa_TTANTCA_UNKNOWN       ID:DB_ID:2372
C=937; O=7; E=0.67; R=10.39; rawP=3.73e-06; adjP=0.0001
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
2  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
3  ENSG00000049192 NA ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 11174 ENSG00000049192
4  ENSG00000169760 NA NLGN1 neuroligin 1 22871 ENSG00000169760
5  ENSG00000106069 NA CHN2 chimerin (chimaerin) 2 1124 ENSG00000106069
6  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
7  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_V$POU6F1_01       ID:DB_ID:2119
C=237; O=4; E=0.17; R=23.48; rawP=2.49e-05; adjP=0.0004
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000165061 NA ZMAT4 zinc finger, matrin-type 4 79698 ENSG00000165061
2  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
3  ENSG00000086475 NA SEPHS1 selenophosphate synthetase 1 22929 ENSG00000086475
4  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_V$HNF1_01       ID:DB_ID:1936
C=244; O=4; E=0.18; R=22.81; rawP=2.79e-05; adjP=0.0004
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
2  ENSG00000049192 NA ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 11174 ENSG00000049192
3  ENSG00000169760 NA NLGN1 neuroligin 1 22871 ENSG00000169760
4  ENSG00000112280 NA COL9A1 collagen, type IX, alpha 1 1297 ENSG00000112280


Database:Transcription Target       Name:hsa_CTTTGA_V$LEF1_Q2       ID:DB_ID:2427
C=1208; O=7; E=0.87; R=8.06; rawP=1.94e-05; adjP=0.0004
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000165061 NA ZMAT4 zinc finger, matrin-type 4 79698 ENSG00000165061
2  ENSG00000106069 NA CHN2 chimerin (chimaerin) 2 1124 ENSG00000106069
3  ENSG00000143816 NA WNT9A wingless-type MMTV integration site family, member 9A 7483 ENSG00000143816
4  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
5  ENSG00000156427 NA FGF18 fibroblast growth factor 18 8817 ENSG00000156427
6  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833
7  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_V$STAT5B_01       ID:DB_ID:2113
C=239; O=3; E=0.17; R=17.46; rawP=0.0007; adjP=0.0045
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000049192 NA ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 11174 ENSG00000049192
2  ENSG00000106069 NA CHN2 chimerin (chimaerin) 2 1124 ENSG00000106069
3  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833


Database:Transcription Target       Name:hsa_V$CIZ_01       ID:DB_ID:2230
C=239; O=3; E=0.17; R=17.46; rawP=0.0007; adjP=0.0045
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
2  ENSG00000124479 NA NDP Norrie disease (pseudoglioma) 4693 ENSG00000124479
3  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_V$ERR1_Q2       ID:DB_ID:2154
C=257; O=3; E=0.18; R=16.24; rawP=0.0008; adjP=0.0045
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000165061 NA ZMAT4 zinc finger, matrin-type 4 79698 ENSG00000165061
2  ENSG00000164073 NA MFSD8 major facilitator superfamily domain containing 8 256471 ENSG00000164073
3  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851


Database:Transcription Target       Name:hsa_V$TCF4_Q5       ID:DB_ID:2199
C=240; O=3; E=0.17; R=17.39; rawP=0.0007; adjP=0.0045
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000165061 NA ZMAT4 zinc finger, matrin-type 4 79698 ENSG00000165061
2  ENSG00000106069 NA CHN2 chimerin (chimaerin) 2 1124 ENSG00000106069
3  ENSG00000169851 NA PCDH7 protocadherin 7 5099 ENSG00000169851




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).